FY07-09 proposal 200725200

Jump to Reviews and Recommendations

Section 1. Administrative

Proposal titleMulti-scale assessment of hyporheic flow, temperature and fish distribution in Columbia River Tributaries
Proposal ID200725200
OrganizationConfederated Tribes of the Umatilla Indian Reservation
Short descriptionWe propose to develop and implement tributary floodplain assessments to evaluate the importance of hyporheic exchange, geomorphic diversity and temperature patterns to salmon productivity across all tributaries of the Columbia River Basin.
Information transferThis information will be available through the CTUIR Environmental Information Node, Streamnet, the Northwest Environmental Database (NED) and the Coordinated Information System (CIS).
Proposal contact person or principal investigator
Contacts
ContactOrganizationEmail
Form submitter
Scott O'Daniel Umatilla Tribes sod111@hotmail.com
All assigned contacts

Section 2. Locations

Province / subbasin: Mainstem/Systemwide / Systemwide

LatitudeLongitudeWaterbodyDescription

Section 3. Focal species

primary: All Anadromous Fish
secondary: All Resident Fish

Section 4. Past accomplishments

YearAccomplishments

Section 5. Relationships to other projects

Funding sourceRelated IDRelated titleRelationship
BPA 198710001 Umatilla Anad Fish Hab - CTUIR The proposed project will inform the type, scope and geographic extents of ongoing habitat restoration projects in the Umatilla River Basin.
BPA 198812025 YKFP Management, Data, Habitat The proposed project will inform the extensive, ongoing floodplain habitat restoration projects in the Lower Yakama River.
BPA 199000501 Umatilla Basin Nat Prod M&E The proposed project will build on several years of data to provide detailed physical maps of stream habitat to standardize statistical tests of natural productivity in the Umatilla River.
BPA 199107300 Idaho Natural Production Monit The proposed project will inform the extensive, ongoing floodplain habitat restoration projects in the Lochsa River.
BPA 199402700 Grande Ronde Model Ws Habitat The proposed project will provide a new type if information to address habitat restoration projects seeking to understand and lower stream temperatures in the Grand Ronde River Basin.
BPA 199401806 Tucannon Stream And Riparian R The proposed project will inform the type, scope and geographic extents of ongoing habitat restoration projects in the Tucannon River Basin.
BPA 199608300 Grand Ronde Watershed Restor The proposed project will provide a new type if information to address habitat restoration projects seeking to understand and lower stream temperatures in the Grand Ronde River Basin.
BPA 199801800 John Day Watershed Restoration The proposed project will inform the type, scope and geographic extents of ongoing habitat restoration projects in the John Day River Basin.
BPA 200003400 Protect N Lochsa Face Analysis The proposed project will inform the extensive, ongoing floodplain habitat restoration projects in the Lochsa River.
BPA 200200600 Bull Trout Movement:Tucannon The proposed project will inform the geographic extents of hyporheic flows that have been liked to Bull Trout spawning and rearing in other PNW rivers (Baxter 1999). This information wil aid the spatial understanding of seasonal Bull trout movement in the Tucannon River.
BPA 200203700 Freshwater Mussels In River The proposed project will provide important physical habitat information (stream velocity and depth) that can be used to predict the locations of freshwater mussels.
BPA 200202800 Oweb Watershed Assessments The proposed project provides new information and techniques that help understand complex stream habitat functions throughout Oregon. Inclusion of these in the OWEB Assessments would allow managers to further understand temperature regimes in Oregon streams.
BPA 200400200 PNAMP Funding The proposed project provides new information and techniques that help understand complex stream habitat functions throughout the CRB. These data may be used along with PNAMP data to provide a richer understanding of stream temperature regimes throughout the CRB.

Section 6. Biological objectives

Biological objectivesFull descriptionAssociated subbasin planStrategy
15: Maximize effectiveness using regional methods Using a mechanistic approach we will classify instream habitats. The outputs of this classification are site specific so that they can be included in R M and E efforts. Umatilla Research, Monitoring, and Evaluation • Develop a research, monitoring, and evaluation plan for the ecosystems of the subbasin that is consistent with and complements the larger regional efforts to track the status of fish and wildlife populations.
2:Habitat protection and improvement. The outputs of this classification are site specific for field biologists to initiate restoration planning efforts. Umatilla Habitat • Restore and enhance degraded and diminished fish and wildlife habitats to support population restoration goals and to mitigate impacts from the construction and operation of the Columbia basin hydropower system and other anthropogenic impact

Section 7. Work elements (coming back to this)

Work element nameWork element titleDescriptionStart dateEnd dateEst budget
Analyze/Interpret Data Classify hyporheic potential of all CRB tributary floodplains Refine and implement a whole river model (O’Daniel 2005) to predict hyporheic the Hyporheic Potential Index in key CRB floodplains. Digital topographic floodplain data would be used to parameterize the model to assess the influence of hyporheic potential on stream temperatures. 10/1/2006 12/1/2008 $200,189
Biological objectives
Metrics
Analyze/Interpret Data Infer floodplain water availability and topography using seasonal vegetation phenology Hyporheic flowpaths that are long in duration and have a large spatial extent have been difficult to measure using geochemical tracers. Because most floodplain vegetation takes advantage of local water sources, the plant senescence is a meaningful measure of sub-surface moisture gradients. Using remote sensing data we can measure changes in plant vigor (greenness) of major overstory vegetation through the water season. Specifically, we will measure the extent of patterns in cottonwood stands that have lagged phenology or greenness persisting through the late summer using the difference between spring and autumn imagery (Rogan 2002; Thenkabail 2003). 10/1/2006 10/1/2007 $66,730
Biological objectives
Metrics
Analyze/Interpret Data Predict the influence of short hyporheic flowpaths on stream temperature Work from our group (Arrigoni et al. submitted) has shown that short hyporheic flow paths (2-17m in length) can reduce the maximum and minimum diel stream temperature. In diverse alluvial channels this exchange of stream water through gravel bars buffers water temperatures and is associated with a variety of diverse floodplain features (Figure ). We propose to extend this field assessment using LIDAR data, by mapping the flowpaths of surface water through bars and islands. Using these methods we can scale these processes up to whole rivers to better understand the functions of normative floodplain features in regulating stream temperatures. 10/1/2006 10/1/2007 $166,824
Biological objectives
Metrics
Analyze/Interpret Data Relate the importance of hyporheic flows to fish use Using the metrics developed in, we will spatially compare geomorphic and thermally diverse stream segments to salmon abundance, species diversity, and life history diversity. Conducting this analysis at multiple spatial scales, we expect to find specific relationships between spatial extent of habitats and salmon use. We also expect to find relationships between life history patterns and thermal regimes. Where there are relatively intact rivers (Wenaha and Yakima) expect abundance to be greater across a wider range of spatial scales, and we expect greater species diversity and life history diversity. In heavily altered reaches, we expect the spatial distribution of salmon to be localized in small thermal refugia, and that some species or life histories may be absent. Further we will investigate spatial relationships between physical habitats and salmon use by incorporating multivariate and spatial statistics methods. 12/1/2008 10/31/2009 $166,824
Biological objectives
Metrics

Section 8. Budgets

Itemized estimated budget
ItemNoteFY07FY08FY09
Personnel [blank] $98,478 $71,482 $75,056
Fringe Benefits [blank] $38,406 $27,878 $29,272
Supplies [blank] $6,160 $3,160 $3,792
Travel [blank] $2,800 $3,080 $3,696
Overhead [blank] $53,962 $39,072 $41,372
Other NOAA/NWFSC and Eco-metrics $26,500 $50,700 $25,700
Totals $226,306 $195,372 $178,888
Total estimated FY 2007-2009 budgets
Total itemized budget: $600,566
Total work element budget: $600,566
Cost sharing
Funding source/orgItem or service providedFY 07 est value ($)FY 08 est value ($)FY 09 est value ($)Cash or in-kind?Status
NASA remote sensing and field validation data $1,154,369 $0 $0 Cash Confirmed
Totals $1,154,369 $0 $0

Section 9. Project future

FY 2010 estimated budget: $0
FY 2011 estimated budget: $0
Comments: This project will end before the FY 2010 cycle.

Future O&M costs:

Termination date: 9/31/2009
Comments:

Final deliverables:

Section 10. Narrative and other documents


Reviews and recommendations

FY07 budget FY08 budget FY09 budget Total budget Type Category Recommendation
NPCC FINAL FUNDING RECOMMENDATIONS (Oct 23, 2006) [full Council recs]
$0 $0 $0 $0 Expense Basinwide Do Not Fund
NPCC DRAFT FUNDING RECOMMENDATIONS (Sep 15, 2006) [full Council recs]
$0 $0 $0 $0 Basinwide

ISRP PRELIMINARY REVIEW (Jun 2, 2006)

Recommendation: Fundable (Qualified)

NPCC comments: Floodplains are among the most productive areas of rivers for salmonid fishes. An important process influencing floodplain productivity is hyporheic flow that creates thermal regimes highly favorable for spawning, incubation, and rearing. The proposed work will identify hyporheic areas in subbasins, predict their effects on stream temperatures, and assess the importance of hyporheic flows fish productivity in floodplain habitats. The work addresses a critical need for habitat restoration in large rivers and is the only work of its kind in the Columbia River Basin. The work will help identify areas of subbasins where restoration would likely yield large benefits for salmonids. The sponsors list an expected benefit as “classification all major floodplains in the Columbia River Basin.” While this benefit may accrue in the future, the funded work should be restricted to the eight key test basins. Technical and scientific background: Parts of the technical background are quite good. The graphics describing large-scale hyporheic analyses are excellent and would be a valuable addition to any subbasin analysis and plan. The background also makes a strong connection between hyporheic flow paths and stream cooling, which will certainly influence where some of the most productive segments of the drainage system for salmonids will be located. There are also some questions that deserved greater attention. The actual influence of hyporheic flow (apart from temperature moderation) could have been more fully explored. Hyporheic zones influence nutrient dynamics, which in turn will affect stream productivity; however, nutrients are not really addressed. The ways in which anthropogenic disturbances have altered hyporheic development (and how these disturbances can be undone) also need to be addressed -- otherwise, how will the information generated by this project be effectively used? Are there some changes (e.g., severe downcutting) that have altered the hyporheos to the point that natural conditions can’t be restored for decades or more? Can such changes be detected by the proposed analytical methods? Although a minor point, some of the figures appeared to have been misplaced in the text (several pages from where they were referenced) and legends were missing, e.g., Fig. 2. Rationale and significance to subbasin plans and regional programs: Developing a cost-effective, accessible technique for identifying areas with high hyporheic potential would clearly benefit subbasin plans. The selection of study areas would seem to be most applicable to Mid-Columbia and Columbia Cascade provinces. The stated goal of classifying "all major floodplains in the Columbia River Basin" would seem to be a bit optimistic without a broader spectrum of study areas; e.g., none of the sites were located in tributaries of the Lower Columbia or Willamette River. However, for the area in which the study takes place, the project would likely provide valuable information. Relationships to other projects: The proposal references many linkages but is not entirely clear about how these linkages would occur. For example, the statement "Outcomes of this project will be directly coordinated with several projects in the Umatilla River Basin; specifically, Quantitative Assessment of Migrating Upstream Lamprey, Project #9402600, Umatilla Habitat Project, #8710002, Walla Walla Basin Habitat Enhancement, #9604601, North Fork John Day River Basin Anadromous Fish Habitat Enhancement, #200003100, Walla Walla Basin Natural Production Monitoring and Evaluation Project, #200003900 and Characterize Genetic Differences and Distribution of Freshwater Mussels, #200203700" simply states the relationship but does not describe how the integration would be achieved; i.e., what products or information will be exchanged. Nearly all the other projects are located in the Mid-Columbia and there is no mention of linkages to related projects in other parts of the basin. This would not be a problem except one of the project's objectives is to classify hyporheic potential throughout the Columbia River Basin, and referencing floodplain work in other areas would be helpful. Objectives: The four objectives were clearly defined, although without much specificity with regard to products or timelines. The objectives also were not explicitly tied to elements of the Fish and Wildlife Program or to individual subbasin plans. The first three objectives describe the methods to be used for classifying floodplains with regard to hyporheic potential. These objectives were very specific. The fourth objective (Relating the importance of hyporheic flows to fish use) was concerned primarily with relating areas with well-developed hyporheic flowpaths to spawner abundance. While this is worthwhile, many of the focal species may not be primarily floodplain spawners but instead may spawn in smaller montane streams. Juvenile salmonid abundance would certainly be worth associating with floodplains with well-developed hyporheic systems. Perhaps this component could be added to the project. Objective 4 also states that geomorphically and thermally diverse stream segments will be related to salmon abundance, species diversity, and life history diversity. While this is also a worthy goal, the proposal does not provide a clear indication of how spatially defined existing biological data are, relative to the stream segments in question. Tasks (work elements) and methods: For the geographic analyses, the proposal describes the methods very completely. For the biological parameters, not enough information is presented to adequately judge the methods. The investigators are experienced with the methodologies required for this work and have successfully applied the approach in the Umatilla basin. Monitoring and evaluation: There are not very many places in the proposal where ground-truthing model predictions are mentioned. While this is probably not a problem in the Umatilla subbasin where CTUIR maintains a very complete database, it could be a real problem for areas of the Columbia River Basin that do not include study sites. Facilities, equipment, and personnel: Facilities are well equipped for this work and the sponsors are well qualified with demonstrated peer-reviewed publication records. Information transfer: The proposal mentions only online data storage and retrieval. There is no mention of reports, publications, or scientific presentations. The sponsors have a good record of peer-reviewed publications and surely results of this work will be published in scientific journals. Benefits to focal and non-focal species: This project has the potential to be of great benefit to focal species if areas with high hyporheic potential can be accurately identified and either protected or restored. The effects of anthropogenic alterations such as diking, shallow water wells, stream downcutting, and removal of riparian vegetation are inadequately discussed. Protecting and/or restoring hyporheic potential should benefit non-focal species too.


ISRP FINAL REVIEW (Aug 31, 2006)

Recommendation: Fundable (Qualified)

NPCC comments: Floodplains are among the most productive areas of rivers for salmonid fishes. An important process influencing floodplain productivity is hyporheic flow that creates thermal regimes highly favorable for spawning, incubation, and rearing. The proposed work will identify hyporheic areas in subbasins, predict their effects on stream temperatures, and assess the importance of hyporheic flows fish productivity in floodplain habitats. The work addresses a critical need for habitat restoration in large rivers and is the only work of its kind in the Columbia River Basin. The work will help identify areas of subbasins where restoration would likely yield large benefits for salmonids. The sponsors list an expected benefit as “classification all major floodplains in the Columbia River Basin.” While this benefit may accrue in the future, the funded work should be restricted to the eight key test basins. Technical and scientific background: Parts of the technical background are quite good. The graphics describing large-scale hyporheic analyses are excellent and would be a valuable addition to any subbasin analysis and plan. The background also makes a strong connection between hyporheic flow paths and stream cooling, which will certainly influence where some of the most productive segments of the drainage system for salmonids will be located. There are also some questions that deserved greater attention. The actual influence of hyporheic flow (apart from temperature moderation) could have been more fully explored. Hyporheic zones influence nutrient dynamics, which in turn will affect stream productivity; however, nutrients are not really addressed. The ways in which anthropogenic disturbances have altered hyporheic development (and how these disturbances can be undone) also need to be addressed -- otherwise, how will the information generated by this project be effectively used? Are there some changes (e.g., severe downcutting) that have altered the hyporheos to the point that natural conditions can’t be restored for decades or more? Can such changes be detected by the proposed analytical methods? Although a minor point, some of the figures appeared to have been misplaced in the text (several pages from where they were referenced) and legends were missing, e.g., Fig. 2. Rationale and significance to subbasin plans and regional programs: Developing a cost-effective, accessible technique for identifying areas with high hyporheic potential would clearly benefit subbasin plans. The selection of study areas would seem to be most applicable to Mid-Columbia and Columbia Cascade provinces. The stated goal of classifying "all major floodplains in the Columbia River Basin" would seem to be a bit optimistic without a broader spectrum of study areas; e.g., none of the sites were located in tributaries of the Lower Columbia or Willamette River. However, for the area in which the study takes place, the project would likely provide valuable information. Relationships to other projects: The proposal references many linkages but is not entirely clear about how these linkages would occur. For example, the statement "Outcomes of this project will be directly coordinated with several projects in the Umatilla River Basin; specifically, Quantitative Assessment of Migrating Upstream Lamprey, Project #9402600, Umatilla Habitat Project, #8710002, Walla Walla Basin Habitat Enhancement, #9604601, North Fork John Day River Basin Anadromous Fish Habitat Enhancement, #200003100, Walla Walla Basin Natural Production Monitoring and Evaluation Project, #200003900 and Characterize Genetic Differences and Distribution of Freshwater Mussels, #200203700" simply states the relationship but does not describe how the integration would be achieved; i.e., what products or information will be exchanged. Nearly all the other projects are located in the Mid-Columbia and there is no mention of linkages to related projects in other parts of the basin. This would not be a problem except one of the project's objectives is to classify hyporheic potential throughout the Columbia River Basin, and referencing floodplain work in other areas would be helpful. Objectives: The four objectives were clearly defined, although without much specificity with regard to products or timelines. The objectives also were not explicitly tied to elements of the Fish and Wildlife Program or to individual subbasin plans. The first three objectives describe the methods to be used for classifying floodplains with regard to hyporheic potential. These objectives were very specific. The fourth objective (Relating the importance of hyporheic flows to fish use) was concerned primarily with relating areas with well-developed hyporheic flowpaths to spawner abundance. While this is worthwhile, many of the focal species may not be primarily floodplain spawners but instead may spawn in smaller montane streams. Juvenile salmonid abundance would certainly be worth associating with floodplains with well-developed hyporheic systems. Perhaps this component could be added to the project. Objective 4 also states that geomorphically and thermally diverse stream segments will be related to salmon abundance, species diversity, and life history diversity. While this is also a worthy goal, the proposal does not provide a clear indication of how spatially defined existing biological data are, relative to the stream segments in question. Tasks (work elements) and methods: For the geographic analyses, the proposal describes the methods very completely. For the biological parameters, not enough information is presented to adequately judge the methods. The investigators are experienced with the methodologies required for this work and have successfully applied the approach in the Umatilla basin. Monitoring and evaluation: There are not very many places in the proposal where ground-truthing model predictions are mentioned. While this is probably not a problem in the Umatilla subbasin where CTUIR maintains a very complete database, it could be a real problem for areas of the Columbia River Basin that do not include study sites. Facilities, equipment, and personnel: Facilities are well equipped for this work and the sponsors are well qualified with demonstrated peer-reviewed publication records. Information transfer: The proposal mentions only online data storage and retrieval. There is no mention of reports, publications, or scientific presentations. The sponsors have a good record of peer-reviewed publications and surely results of this work will be published in scientific journals. Benefits to focal and non-focal species: This project has the potential to be of great benefit to focal species if areas with high hyporheic potential can be accurately identified and either protected or restored. The effects of anthropogenic alterations such as diking, shallow water wells, stream downcutting, and removal of riparian vegetation are inadequately discussed. Protecting and/or restoring hyporheic potential should benefit non-focal species too.