FY 2002 Columbia Plateau proposal 199405400

Section 1. Administrative

Proposal titleThe Population Structure of Bull Trout in the John Day River and Abundance of Bull Trout in Mill Creek.
Proposal ID199405400
OrganizationOregon Department of Fish and Wildlife (ODFW)
Proposal contact person or principal investigator
NameTimothy A. Whitesel
Mailing address2501 SW First Ave., P.O. Box 59 Portland, OR 97207
Phone / email5038725252 / timothy.a.whitesel@state.or.us
Manager authorizing this projectRobert Hooton
Review cycleColumbia Plateau
Province / SubbasinColumbia Plateau / John Day
Short descriptionTo aid in conservation efforts, assess the population structure of bull trout in the John Day River subbasin, explore methods to monitor the abundance of bull trout in Mill Creek, and describe the piscivorous nature of bull trout in various environments.
Target speciesBull trout, (Salvelinus confluentus).
Project location
LatitudeLongitudeDescription
Multiple areas within the John Day River subbasin, including S.F. Desolation Cr., Baldy Cr., Big Cr., Clear Cr., Call Cr., and Indian Cr.
Mill Creek and tributaries, in the Walla Walla River subbasin.
46.0386 -118.4778 Mill Creek
44.8196 -118.6888 South Fork Desolation Creek
44.9098 -118.3176 Baldy Creek
44.7658 -118.8742 Big Creek
44.8213 -118.45 Clear Creek
44.3201 -118.5571 Call Creek
44.7974 -118.9114 Indian Creek
44.9552 -121.4507 Warm Springs River
44.66 -119.83 Area S. of John Day River
Reasonable and Prudent Alternatives (RPAs)

Sponsor-reported:

RPA

Relevant RPAs based on NMFS/BPA review:

Reviewing agencyAction #BiOp AgencyDescription

Section 2. Past accomplishments

YearAccomplishment
1996 Completed sampling and DNA analysis of 46 populations of bull trout in Oregon, Washington and Idaho to describe genetic structure of bull trout populations.
1996 Collected of summer temperature data from streams which contain bull trout and brook trout.
1996 Completed multiple pass spawning surveys of three streams, three exploratory surveys.
1996 Completed the 1995 Annual Report.
1997 Conducted distribution and habitat surveys of 17 streams with sympatric populations of bull trout and brook trout (began in 1996).
1997 Conducted radio telemetry study of movements and habitat use of bull trout juveniles and adults.
1997 Collected of summer temperature data from streams which contain bull trout and bull trout.
1997 Completed multiple pass spawning surveys of three streams, two exploratory surveys.
1997 Completed statewide bull trout distribution maps (entered into GIS system).
1997 Made two presentations at the annual meeting of the Oregon Chapter, American Fisheries Society.
1997 Completed the 1996 Annual Report.
1998 Completed fieldwork portion of enclosure study of bull trout/brook trout interactions, growth and feeding behavior.
1998 Conducted radio telemetry study of movements and habitat use of bull trout juveniles and adults.
1998 Collected of summer temperature data from streams which contain bull trout and bull trout (ongoing).
1998 Conducted adult and juvenile movement studies in upper John Day and Walla Walla subbasins (ongoing).
1998 Completed multiple pass spawning surveys of three streams, spawner population estimate of one stream, and one exploratory survey (ongoing).
1998 Completed thermal videography of Wenaha River (Grande Ronde subbasin).
1998 Made two presentations at the annual meeting of the Oregon Chapter, American Fisheries Society.
1998 Made two presentations at the annual Salvelinus confluentus Curiosity Society workshop.
1998 Made two presentations at the special bull trout meeting of the North Pacific International Chapter, American Fisheries Society.
1999 Completed analysis of bull trout/brook trout interactions.
1999 Completed laboratory description of bull trout and brook trout diets.
1999 Conducted radio telemetry study of movements and habitat use of bull trout juveniles and adults in upper John Day, Walla Walla, Grande Ronde, and Deschutes river subbasins.
1999 Collected of summer temperature data from streams which contain bull trout and brook trout (ongoing).
1999 Conducted adult and juvenile movement studies (traps) in upper John Day, Walla Walla, and Deschutes river subbasins (ongoing).
1999 Conducted distribution and habitat surveys of three stream systems with sympatric populations of bull trout and brook trout in the Deschutes River subbasin.
1999 Completed multiple pass spawning surveys of three streams and exploratory surveys in four streams (ongoing).
1999 Estimated age at maturity and spawner abundance in one population of bull trout with resident life history form.
1999 Made one presentation at the annual meeting of the Oregon Chapter, American Fisheries Society.
1999 Made one presentations at the special bull trout meeting of the North Pacific International Chapter, American Fisheries Society.
2000 Presented data at and participated in US Fish and Wildlife sponsored, Recovery Team meetings (ongoing).
2000 Completed, submitted, and defended master's thesis at Oregon State University on the interactions of bull and brook trout.
2001 Completed the 1997 Annual Report.
2001 Completed the 1998 Annual Report.
2001 Distributed master's thesis on bull and brook trout interactions to regional biologists and managers.
2001 Made one presentation at the annual meeting of the Oregon Chapter, American Fisheries Society.
2001 Presented data at and participated in US Fish and Wildlife sponsored, Recovery Team meetings (ongoing).

Section 3. Relationships to other projects

Project IDTitleDescription
199306600 Northeast Oregon Fish Screening and Passage Project. Supportive. The population structure of bull trout may be influenced by or reflect screening and passage issues.
200003100 North Fork John Day Habitat Project. Supportive. Population structure may be influenced by or reflect habitat availability.
199801800 John Day Watershed Restoration Project. Supportive. Passage improvement is likely related to connectiveness and population structure.
199801700 Eliminate Gravel Push-Up Dams on Lower North Fork John Day. Supportive. Improvements in habitat and ability to migrate may be related to the connectivity between bull trout populations and their population structure.
199606400 Walla Walla, Touchet, and Mill Creek Riparian Habitat Enhancement. Supportive. Enhanced habitat in Mill Creek may support larger numbers of bull trout. The proposed study would maintain and improve a database on the abundance of bull trout in Mill Creek.
200001270 Monitor and Evaluate the Natural Production, Distribution, Abundance and Genetics of Salmonids. Supportive. The proposed study would document and maintain a database on the abundance of bull trout in Mill Creek.
199405400 Bull Trout Genetics, Habitat Needs, Life History… Supportive. The Confederated Tribes of the Warm Springs Reservation have, and plan to continue, focusing efforts on monitoring abundance in the Descutes River bsain. Results from the proposed project will compliment those from the Deschutes River.

Section 4. Budget for Planning and Design phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2002 costSubcontractor
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
Outyear budgets for Planning and Design phase

Section 5. Budget for Construction and Implementation phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2002 costSubcontractor
Objective 1. The first objective of this project is to characterize the fine-scale population structuring of bull trout within the John Day River subbasin. Task 1.1. Using previously collected samples that are archived (Indian Creek, Big Creek, South Fork desolation Creek, Baldy Creek, and Clear Creek from the North Fork John Day River), reanalyze three additional loci. 1 $3,100 Yes
Task 1.2. To supplement archived samples, collect fin tissue from 30 additional fish in each of Reynolds Creek, Indian Creek, South Fork Desolation Creek, Call Creek, Clear Creek from the Middle Fork of the John Day River, Big Creek, Baldy Creek, and Cle 1 $20,200
Task 1.3. Analyze genetic variation among local populations from samples using a combination of data from four microsatellite loci previously analyzed and three additional loci. Samples will be analyzed, likely the year following collections, by the Wil 1 $0 Yes
Task 1.4. Publish results of the analysis annual reports and peer reviewed publications as well as present these results at technical meetings. 1 $2,100
Objective 2. The second objective of this project is to compare methods that estimate the abundance of spawning bull trout in Mill Creek, a tributary with both migratory and resident spawners. $0
Subobjective 2.1. Estimate the abundance of migratory (fluvial) adult bull trout in Mill Creek. Task 2.1.1. Count and measure upstream migrants passing the Mill Creek diversion dam. 3 $13,500 Yes
Task 2.1.2. Determine size at maturity and the proportion of mature individuals among upstream migrants using ultrasound or endoscopy (see Hemmingsen et al. in press). 3 $7,500
Task 2.1.3. Mark upstream migrants passing the diversion dam. 3 $2,500 Yes
Task 2.1.4. Estimate total abundance above the diversion dam using snorkel counts of marked and unmarked bull trout and mark-recapture analysis. 3 $2,500
Subobjective 2.2. Estimate the number and size of bull trout redds and determine the size of females responsible for those redds. Task 2.2.1. Conduct extensive bi-weekly spawning surveys (see Bellerud et al. 1997). 3 $11,000
Task 2.2.2. Calculate sampling error for redd counts using data from Hemmingsen et al. (in press). 3 $2,500
Task 2.2.3. Determine if a relationship exists between redd size and female spawner size. If such a relationship does exist, estimate the number of redds made by fluvial and resident female spawners. 3 $2,500
Subobjective 2.3. Determine the accuracy and precision of redd counts as a measure of the abundance of fluvial bull trout. Task 2.3.1. Compare redd counts to dam counts and mark-recapture estimates. 3 $2,500
Subobjective 2.4. Estimate the number of resident adult bull trout. Task 2.4.1. Estimate densities of bull trout (< 300 mm) in randomly selecting stream reaches. Reach length will be set at 30 times the active channel width (or approximately 100 m). Reaches would be snorkeled and calibrated for snorkeling efficiency. 3 $5,250
Task 2.4.2. Determine size at maturity and the proportion of mature individuals using ultrasound or endoscopy (see Hemmingsen et al. in press). 3 $3,750
Task 2.4.3. Extrapolate densities of adults to produce an estimate of total population size using area-under-the-curve techniques (Dambacher et al. 1999). 3 $2,500
Subobjective 2.5. Determine the accuracy and precision of redd counts as a measure of the abundance of resident bull trout. Task 2.5.1. Compare redd counts to surveys estimates of resident bull trout. 3 $2,500
Subobjective 2.6. Disseminate information in a timely and effective manner. Task 2.6.1. Publish results of the analysis annual reports and peer reviewed publications as well as present these results at technical meetings. 3 $2,500
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
Objective 1. The first objective of this project is to characterize the fine-scale population structuring of bull trout within the John Day River subbasin. 2003 2004 $49,500
Objective 2. The second objective of this project is to compare methods that estimate the abundance of spawning bull trout in Mill Creek, a tributary with both migratory and resident spawners. 2003 2004 $123,400
Outyear budgets for Construction and Implementation phase
FY 2004FY 2003
$78,500$94,400

Section 6. Budget for Operations and Maintenance phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2002 costSubcontractor
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
Outyear budgets for Operations and Maintenance phase

Section 7. Budget for Monitoring and Evaluation phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2002 costSubcontractor
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
Outyear budgets for Monitoring and Evaluation phase

Section 8. Estimated budget summary

Itemized budget
ItemNoteFY 2002 cost
Personnel FTE: 1.25 $33,002
Fringe 38.0% $12,540
Supplies $3,400
Travel $3,700
Indirect 24.5% $11,158
Capital endoscope $3,500
NEPA none $0
PIT tags # of tags: 0 $0
Subcontractor genetics analysis and operating the fish ladder $19,100
$86,400
Total estimated budget
Total FY 2002 cost$86,400
Amount anticipated from previously committed BPA funds$0
Total FY 2002 budget request$86,400
FY 2002 forecast from 2001$392,654
% change from forecast-78.0%
Reason for change in estimated budget

This reduction reflects the division of a systemwide project (that was used to make the FY 2002 forecast) to a province-specific project.

Reason for change in scope

Implementation of the provincial review process.

Cost sharing
OrganizationItem or service providedAmountCash or in-kind
U.S. Forest Service Personal services (FY 2002-2004). $29,000 in-kind
ODFW Personal services (FY 2002-2004). $22,700 in-kind
University of Montana Personal Services and supplies. $2,700 in-kind

Reviews and recommendations

This information was not provided on the original proposals, but was generated during the review process.

Recommendation:
Fundable only if response is adequate
Date:
Jun 15, 2001

Comment:

Fundable if adequate responses are given to ISRP concerns. The stated objective is to test night snorkeling efficacy versus day snorkeling or electrofishing is likely not necessary. Night snorkeling is generally recognized as an efficient method for detecting bull trout. There may be logistical reasons to explore to the relationship between detections based on day snorkeling and day electrofishing, however the proposal could have described this need more compellingly. Thus, the need for tasks associated with this objective need to be better justified to support funding. For the purposes of management of bull trout in the Deschutes basin, it is doubtful that the precision generated by the methods comparison is necessary. Relative abundance and trend data probably give sufficient resolution for most management level questions.

The proposal implies that part of the rationale for the comparison of sampling methods is the inclusion of the Deschutes data into a larger regional bull trout dataset being assembled by Russ Thurow and colleagues at the USFS Rocky Mountain Experiment Station in Boise. The presentation amplified this relationship. The proposal needs to provide additional documentation on the linkage to the USFS regional protocol and the involvement of Thurow et al., even if no funding is allocated to the Boise station.

Study reaches need to be selected in cooperation with Projects #25088 and #25010. Use of index reaches (Objective 1 and 3) or survey of known spawning ground surveys (Objective 3) have proven to be unacceptable in most fisheries monitoring and evaluation programs, e.g., the Oregon Coastal Coho surveys where they have been replaced by probabilistic sampling procedures developed by the EPA\EMP program. Selection of long-term sampling reaches for this project should be selected in cooperation with Projects #25088 and #25010. "Index sites" could be used for development of subsampling procedures, but they should be part of a systematic sample of collocated sites if possible.


Recommendation:
High Priority
Date:
Aug 3, 2001

Comment:

This project now includes the proposed work submitted by the CTWSRO under the same project number as well as Objective 4 of the original 25088 proposal (i.e., pre-ISRP review) that was submitted by ODFW. ODFW and the CTWSRO will be cooperators on this project. The RFC questions whether it is BPA's responsibility to fund AFS protocol evaluations. The RFC also indicated that all ODFW bull trout proposals that will be submitted in the upcoming provinces should be grouped under one project number (i.e., 199405400) [Additional Comments in another Record, for same project:] The activities in this proposal are now Objectives 3, 6, 7, and 8 in ODFW's Project Number 199405400. In previous years, these objectives were included in ODFW's 199405400.
Recommendation:
Fund
Date:
Aug 10, 2001

Comment:

Fundable. The response addressed the ISRP's concerns very well.
Recommendation:
Date:
Oct 1, 2001

Comment:

Statement of Potential Biological Benefit to ESU
N/A

Comments

Already ESA Req? N/A

Biop? no


Recommendation:
Rank B
Date:
Oct 16, 2001

Comment:

All of this work by ODFW and the Tribe would be covered under this project number; however, BPA does not believe that the funding of AFS protocol evaluations is its responsibility.
Recommendation:
Fund
Date:
Jan 3, 2002

Comment:

Project 199405400 Characterize the Migratory Patterns, Structure, Abundance and Status of Bull Trout in the Plateau represents a joint ODFW and CTWSRO project, plus the bull trout component of Project 25088 (see Council comments for proposal 25088). The project includes ongoing work from a CTWSRO component for the Deschutes (see Deschutes Issue 3) and an ongoing ODFW component in the John Day. It also includes the bull trout EMAP assessment work that had been an aspect of ODFW project 25088. CBFWA and ISRP agreed on a fundable - high priority recommendation for the project. Project sponsors note that conglomerating these tasks results in a 5% savings over what it would have cost to fund the tasks separately.

Staff Recommendation: Funding depends on Council resolution of General Issue 7 (bull trout new work) and the application of the proposed funding criteria that relate to new assessment work (for the effect on assessment work portion of the proposal). Much of the work in the project is ongoing and would merit continued funding under the funding criteria that prioritizes continuing services for ongoing projects. The October 29 letter from the Fish and Wildlife Service also recommended that the project be supported to meet measures and terms and conditions in the BiOp. The new work involving tasks added from project 25088 would appear to be assessment type of activities. This work was also supported by the Service and appears to support subbasin planning under the Council's program.

Budget effect on base program (Project 199405400):

 

FY 2002 FY 2003 FY 2004
Increase $154,340 Increase $154,340 Increase $154,340

Recommendation:
Fund
Date:
Mar 6, 2002

Comment:

Bund - BPA will seek additional review of project objectives with the project sponsor in order to arrive at an appropriate budget during the contracting process.
REVIEW:
NW Power and Conservation Council's FY 2006 Project Funding Review
Funding category:
expense
Date:
May 2005
FY05 NPCC start of year:FY06 NPCC staff preliminary:FY06 NPCC July draft start of year:
$490,750 $490,750 $490,750

Sponsor comments: See comment at Council's website