FY 2003 Mainstem/Systemwide proposal 200310900

Additional documents

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35060 Narrative Narrative
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Section 1. Administrative

Proposal titleInstream evaluation of populations, migration, individual adult return and wild-hatchery interactions of naturally produced salmonids
Proposal ID200310900
OrganizationU.S. Fish and Wildlife Service (USFWS)
Proposal contact person or principal investigator
NameGayle B. Zydlewski
Mailing address1440 Abernathy Creek Road Longview, WA 98632
Phone / email3604256072 / gayle_zydlewski@fws.gov
Manager authorizing this projectCarl Burger, Center Director
Review cycleMainstem/Systemwide
Province / SubbasinMainstem/Systemwide /
Short descriptionEvaluate stock status, distribution, and abundance of juvenile and adult salmonids using new PIT tag techniques.
Target speciessteelhead trout, coho salmon, cutthroat trout
Project location
LatitudeLongitudeDescription
46.1884 -123.1679 Abernathy Creek (mouth = 87 km from mouth of Columbia River)
Reasonable and Prudent Alternatives (RPAs)

Sponsor-reported:

RPA
193
188
107
184
192
199 1036 1193
183
174#4

Relevant RPAs based on NMFS/BPA review:

Reviewing agencyAction #BiOp AgencyDescription
NMFS Action 184 NMFS The Action Agencies and NMFS shall work within regional prioritization and congressional appropriation processes to establish and provide the appropriate level of FCRPS funding for a hatchery research, monitoring, and evaluation program consisting of studies to determine whether hatchery reforms reduce the risk of extinction for Columbia River basin salmonids and whether conservation hatcheries contribute to recovery.
NMFS Action 188 NMFS The Action Agencies and NMFS shall work within the annual planning and congressional appropriation processes to establish and provide the appropriate level of FCRPS funding for studies of PIT-tagged wild stocks from the lower river streams. The studies shall be used to contrast stock productivity and hydrosystem effects.

Section 2. Past accomplishments

YearAccomplishment
2001 Smolt monitoring at a screwtrap in Abernathy Creek (WDFW). Juvenile steelhead trout production is estimated at 11,000 fish. Juvenile coho salmon smolt production is estimated at 7,000 fish. Juvenile cutthroat trout production is estimated at 750.
2001 PIT tag interrogation infrastructure established in coordination with Pacific States Marine Fisheries Commission (PSMFC) at Abernathy Fish Technology Center (AFTC).
2001 PIT tag interrogation infrastructure was established in coordination with PSMFC at a remote location on Abernathy Creek.
2001 An array of three antennae (stationary detectors) were built and permanently positioned at AFTC in coordination with Destron Fearing, USFWS Columbia River Fisheries Program Office, and Smith-Root, Inc.
2001 An array of stationary detectors were built and permanently positioned at a remote location on Abernathy Creek.
2001 Remote communications and computer connectivity between both stationary units were established with PSMFC so that all data are continuously updated to the PTAGIS database.
2001 Initiated PIT tag retention study for coho salmon using 3 different PIT tag sizes. For the 207 coho tagged (averaging 132 mm fork length) over the current period of the study (3 months) one fish lost a 23 mm tag and one died, tag retention rate = 99.0%.
2001 Initiated PIT tag retention study for cutthroat trout with 23 mm tags. For the 101 fish tagged the tag retention rate was 100%.
2001 Initiated evaluation of a portable back-pack unit for mobile detection of PIT tagged fish.
2001 In October 2001 juvenile steelhead trout (1200 individuals) have been captured, PIT tagged and are being continuously monitored for movements from tagging location to stationary detectors on Abernathy Creek.
2001 In October 2001 juvenile and adult cutthroat trout (450 individuals) have been captured, PIT tagged and are being continuously monitored for movements from tagging location to stationary detectors on Abernathy Creek.
2001 In October 2001 seven juvenile coho salmon were captured, PIT tagged and are being continuously monitored for movements from tagging location to stationary detectors on Abernathy Creek.
2002 Initiated PIT tag retention study for steelhead trout using 3 different PIT tag sizes. For the 300 steelhead trout tagged (averaging 124 mm fork length) over the current period of the study (4.5 months) overall tag retention was 97%.
2002 To date over 200 individuals (steelhead trout, cutthroat trout, and coho salmon) have migrated 1-10 km downstream from all sections of Abernathy Creek.
2002 Detection efficiencies at the remote site are optimized and approximate 100%. Efficiencies at the AFTC site are not optimized but are approximated to be greater than 80% detection of all fish passing at any water level.
2002 Scale samples from salmonids collected in the Fall of 2001 have been processed and still need to be aged.
2002 Approximately 50 steelhead and cutthroat trout tagged in the Fall of 2001 have been recaptured in a smolt trap being fished at the mouth of Abernathy Creek. Fish were lengthed, weighed, and a gill biopsy for smolt condition was taken.
2002 A protocol for the mobile/backpack interrogation of PIT tagged fish has been developed to verify efficiciency of the unit and identify habitat perferences of individual fish.

Section 3. Relationships to other projects

Project IDTitleDescription
198331901 New PIT Tag monitoring equipment Both studies are working together to provide new and different PIT tag monitoring technology. The currently proposed project takes the tecnologies developed previously to the level of implementation in research, monitoring and evaluation efforts.
199701501 Imnaha Smolt Survival and Smolt to Adult Return Rate Quantification (formerly the Imnaha Smolt Monitoring Program) Researchers of the Imnaha Project hope to implement the technologies established in the current proposal. Results from this proposal will be important for their establishment of smolt emigration monitoring.
199008000 Columbia Basin PIT-Tag Information Systems The current proposal will be providing information for the databases established by PSMFC in project #199008000. PSMFC has helped establish the infrastructure required for continuous connectivity to the database.

Section 4. Budget for Planning and Design phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2003 costSubcontractor
Objective 1. Determine abundance and natural production of juvenile, smolt and adult salmonids in Abernathy Creek. Task a. Monitor freshwater life history characteristics of naturally spawned juvenile steelhead trout, coho salmon, and cutthroat trout in Abernathy Creek. 5 $3,064
Objective 1 Task b. Monitor adult return of juveniles PIT tagged in Task a. 5 $17,078
Objective 2. Evaluate the effects of steelhead trout supplementation efforts on natural population dynamics of steelhead trout, cutthroat trout, and coho salmon. Task b. Assess frequency and magnitude of ecological interactions between hatchery-released and naturally-produced steelhead trout (hatchery vs. wild). 4 $24,475
Objective 3. Evaluate novel tagging techniques for long-term research, monitoring, and evaluation efforts. Task a. Evaluate effects of tag size on fish survival and growth. 1 $8,088
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
1. Abundance and natural production of salmonids in Abernathy Creek , Task a. 2003 2007 $9,192
Outyear budgets for Planning and Design phase
FY 2004FY 2005FY 2006
$3,064$3,064$3,064

Section 5. Budget for Construction and Implementation phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2003 costSubcontractor
Objective 1. Determine abundance and natural production of juvenile, smolt and adult salmonids in Abernathy Creek. Task a. Monitor freshwater life history characteristics of naturally spawned juvenile steelhead trout, coho salmon, and cutthroat trout in Abernathy Creek. 5 $18,300
Objective 2. Evaluate the effects of steelhead trout supplementation efforts on natural population dynamics of steelhead trout, cutthroat trout, and coho salmon. Task b. Assess frequency and magnitude of ecological interactions between hatchery-released and naturally-produced steelhead trout (hatchery vs. wild). 4 $7,200
Objective 3. Evaluate novel tagging techniques for long-term research, monitoring, and evaluation efforts. Task a. Evaluate effects of tag size on fish survival and growth. 1 $10,125
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
1. Abundance and natural production of salmonids in Abernathy Creek , Task a. 2003 2007 $65,941
2. Effects of steelhead supplementation, Task b. 2003 2006 $8,235
3. New techniques for long-term research, monitoring, and evaluation, Task b. 2005 2005 $2,745
Outyear budgets for Construction and Implementation phase
FY 2004FY 2005FY 2006
$35,014$22,326$19,581

Section 6. Budget for Operations and Maintenance phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2003 costSubcontractor
Objective 1. Determine abundance and natural production of juvenile, smolt and adult salmonids in Abernathy Creek. Task a. Monitor freshwater life history characteristics of naturally spawned juvenile steelhead trout, coho salmon, and cutthroat trout in Abernathy Creek. 5 $53,420 Yes
Objective 2. Evaluate the effects of steelhead trout supplementation efforts on natural population dynamics of steelhead trout, cutthroat trout, and coho salmon. Task a. Determine timing of release of supplemental steelhead trout. 5 $10,000
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
1. Abundance and natural production of salmonids in Abernathy Creek , Task a. 2003 2007 $216,120
2. Effects of steelhead supplementation, Task b. 2003 2007 $20,000
Outyear budgets for Operations and Maintenance phase
FY 2004FY 2005FY 2006FY 2007
$63,420$58,420$59,640$54,640

Section 7. Budget for Monitoring and Evaluation phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2003 costSubcontractor
Objective 1. Determine abundance and natural production of juvenile, smolt and adult salmonids in Abernathy Creek. Task a. Monitor freshwater life history characteristics of naturally spawned juvenile steelhead trout, coho salmon, and cutthroat trout in Abernathy Creek. 5 $56,445 Yes
Objective 2. Evaluate the effects of steelhead trout supplementation efforts on natural population dynamics of steelhead trout, cutthroat trout, and coho salmon. Task b. Assess frequency and magnitude of ecological interactions between hatchery-released and naturally-produced steelhead trout (hatchery vs. wild). 4 $21,411
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
1. Abundance and natural production of salmonids in Abernathy Creek , Task a. 2003 2007 $225,780
1. Abundance and natural production of salmonids in Abernathy Creek , Task b. 2003 2007 $58,560
2. Effects of steelhead supplementation, Task b. 2003 2006 $128,466
Outyear budgets for Monitoring and Evaluation phase
FY 2004FY 2005FY 2006FY 2007
$112,687$113,907$113,907$72,305

Section 8. Estimated budget summary

Itemized budget
ItemNoteFY 2003 cost
Personnel FTE: 1.0 GS7 1.5 GS5 0.1 GS11 0.25 GS12 $88,805
Fringe 35% $31,081
Supplies Itemized list in "other budget explanation" below $15,000
Travel Trip to AFS annual meeting $1,000
Indirect 22% $29,895
PIT tags # of tags: 7700 $17,325
Subcontractor Smith-Root, Inc. $6,500
Subcontractor Destron Fearing $15,000
Subcontractor Washington Department of Fish and Wildlife $20,000
Subcontractor Pacific States Marine Fisheries Commission $5,000
$229,606
Total estimated budget
Total FY 2003 cost$229,606
Amount anticipated from previously committed BPA funds$0
Total FY 2003 budget request$229,606
FY 2003 forecast from 2002$0
% change from forecast0.0%
Cost sharing
OrganizationItem or service providedAmountCash or in-kind
USFWS Planning and development, GS12 time $10,000 in-kind
Other budget explanation

Itemized equipment budget for FY 2003 Operation and maintenance of PIT tag units: Replacement transceiver $6,000 Oscilloscope $2,000 Current probe $800 Battery backup $500 Solar chargers $2,860 Satellite service for remote site $840 Underwater video $2,000 Total: $15,000


Reviews and recommendations

This information was not provided on the original proposals, but was generated during the review process.

Recommendation:
Fundable - no response required
Date:
Aug 2, 2002

Comment:

No response is needed. Fundable at a medium priority. The proposed project seems like a logical extension of the previously funded innovative project.

As with proposal #35063, this is the second time we have reviewed this proposal recently. The value we see in this work is in Objective 1 to assess "abundance and natural production of juvenile, smolt and adult salmonids while developing and providing standard protocols for stock monitoring programs." If standard methods, tools, and protocols can be established for small stream assessments in the Basin, this could have significant general value outside of the immediate stream. We encourage the proponents to prioritize their work with emphasis on population assessment methods and sampling protocols.

Ms. Zydlewski has made a significant contribution through her work to develop stationary remote and portable detectors for PITs, and is now developing a proposal to utilize that technology. But in reviewing the objectives of this proposal, their Regional value seems limited to the development of sampling protocols for small stream assessments (useful), examination of tagging impacts on growth (assessed within a hatchery environment and with hatchery fish ... limited value), or otherwise mostly of local value in Abernathy Creek. Her reference to life history stages is really limited to pre-migratory, at migration and following in freshwater (residualism), and at adult return. For each of these stages, population size and survivals would be estimated but the methods for estimation are not fully described.

For example, in the three stages:

  1. in-river, pre-migration population size would be estimate by depletion methods (for 3 sites), but how is this sample expanded to the total stream and species;
  2. during migration, smolts population estimates would be estimated with the fixed array and/or smolts traps, but it is not clear how the fixed array provides a population estimate;
  3. at the adult stage (and assuming the new fish barrier is installed), all fish would be sampled but how would all the hatchery fish be identified (presumably associated with #35063).

In objective 2, they propose to assess frequency and magnitude of ecological interactions between hatchery-released and naturally produced salmonids. "Frequency and magnitude of individual interactions will be continually monitored at the stationary units and will be discontinuously monitored, but on a regular basis, with the portable unit." Page 13 of Section 9). However, these detections may monitor the movement and co-occurrence of these fish, but is this an adequate assessment of interactions? Objective 3 refers to novel tagging techniques but what is novel and important is not elaborated.

Action Agency/NMFS RME Group Comments:

STATUS MONITORING SUBGROUP -- This proposal seeks to evaluate stock status, distribution, and abundance of juvenile and adult salmonids using new PIT tag techniques.

The proposal does not indicate applicability to either RPA 180 or RPA 181. None of the target species in the study area belong to ESUs covered by the NMFS 2000 FCRPS BiOp. The project proposes to study, among other things, the effects of PIT-tag size on juvenile fish survival and growth, which could be considered testing of tools (i.e., PIT tags) that are widely used in some monitoring activities that do satisfy RPA 180. Therefore, while the proposal does not directly meet RPA needs, the methodological aspects of the work, as well as its potential contribution to the development of Biological Opinion status monitoring performance standards merit consideration.

ISRP Remarks on RME Group Comments:

The ISRP and RME group comments are consistent.


Recommendation:
High Priority
Date:
Oct 24, 2002

Comment:

This project follows up the Innovative project that developed PIT tagging technology for monitoring smolts in small streams. The goal of the project would be to develop a standardized procedure for implementing this technology throughout the Basin and expanding the sampling to include returning adults. If this project and Project Number 35027 are both funded, cost efficiencies will be available.
Recommendation:
Fund
Date:
Nov 5, 2002

Comment:

Fundable at a medium priority. We agree with CBFWA's review and middle ranking of High Priority. A response was not needed. The proposed project seems like a logical extension of the previously funded innovative project. This is the second time we have reviewed this proposal recently. The value we see in this work is in Objective 1: to assess "abundance and natural production of juvenile, smolt and adult salmonids while developing and providing standard protocols for stock monitoring programs." If standard methods, tools, and protocols can be established for small stream assessments in the Basin, this could have significant general value outside of the immediate stream. We encourage the proponents to prioritize their work with emphasis on population assessment methods and sampling protocols.

The project sponsor has made a significant contribution through her work to develop stationary remote and portable detectors for PIT tags, and is now developing a proposal to utilize that technology. However, in reviewing the objectives of this proposal, their value to the region seems limited to the development of sampling protocols for small stream assessments (useful), examination of tagging impacts on growth (assessed within a hatchery environment and with hatchery fish ... limited value), or otherwise mostly of local value in Abernathy Creek.

If funded, this project should be coordinated with other monitoring projects to ensure compatibility of objectives, common methods, and protocols. This coordination could be accomplished under the favorably reviewed CBFWA proposal #35033.


Recommendation:
Date:
Jan 21, 2003

Comment:

Statement of Potential Biological Benefit
Indirect. The projects uses PIT tags to explicitly quantify life history characteristics, survival and hatchery wild interactions at several life stages from pre-smolt to adult.

Comments
This proposal concerns the evaluation of stock status, distribution, and abundance of juvenile and adult salmonids using new PIT tag techniques. Objective 1 of the proposal appears to be specific to small streams and Abernathy Creek, in particular, and does not target ESA listed-species that belong to ESUs covered by the NMFS 2000 FCRPS BiOp. However, the results could be easily transferable to listed species. Objective 2 of the proposal would assess frequency and magnitude of ecological interactions between hatchery-released and naturally produced salmonids. It is not certain that monitoring the movement and co-occurrence of these fish (using PIT tag monitors) will provide a complete assessment of hatchery/wild interactions. However, it is an issue of biological importance to ESA-listed species.

Already ESA Required?
No

Biop?
Yes


Recommendation:
Do Not Fund (Tier 3)
Date:
Jun 11, 2003

Comment:

Category:
3. Other projects not recommended by staff

Comments: