FY 2003 Mainstem/Systemwide proposal 199602100

Additional documents

TitleType
199602100 Narrative Narrative
199602100 Powerpoint Presentation Powerpoint Presentation
199602100 Sponsor Response to the ISRP Response

Section 1. Administrative

Proposal titleGas bubble disease research and monitoring of juvenile salmonids
Proposal ID199602100
OrganizationU.S. Geological Survey-Biological Resouces Division, Columbia River Research Lab (USGS)
Proposal contact person or principal investigator
NameDr. Alec G. Maule
Mailing addressCRRL, 5501A Cook-Underwood Rd. Cook, WA 98605
Phone / email5095382299 / alec_maule@usgs.gov
Manager authorizing this projectDr. James Seelye
Review cycleMainstem/Systemwide
Province / SubbasinMainstem/Systemwide /
Short descriptionProvide support for the Smolt Monitoring Program (SMP) monitoring juvenile salmonids for signs of gas bubble disease. Activities include (1) care and maintainence of equipment, (2) training, and (3) QA/QC
Target specieschinook salmon and steelhead
Project location
LatitudeLongitudeDescription
Systemwide-at dams where juvenile salmonids are examined for GBT
Reasonable and Prudent Alternatives (RPAs)

Sponsor-reported:

RPA
131, 134 Determine the assoc. between spill & GBD
34, 141, 142, 143

Relevant RPAs based on NMFS/BPA review:

Reviewing agencyAction #BiOp AgencyDescription
NMFS Action 131 NMFS The Action Agencies shall monitor the effects of TDG. This annual program shall include physical and biological monitoring and shall be developed and implemented in consultation with the Water Quality Team and the Mid-Columbia PUDs' monitoring programs.
NMFS/BPA Action 131 NMFS The Action Agencies shall monitor the effects of TDG. This annual program shall include physical and biological monitoring and shall be developed and implemented in consultation with the Water Quality Team and the Mid-Columbia PUDs' monitoring programs.

Section 2. Past accomplishments

YearAccomplishment
2002 Maintained and distributed dissecting microscopes and other supplies to SMP
2002 Trained SMP employees, USFWS and regional consultants in the proper method for detecting signs of GBT
2002 Provided support for QA/QC
2001 same as 2002
2000 same as 2002
1999 same as 2002
1998 same as 2002
1997 same as 2002
1996 same as 2002
1997 Maule, A.G., J. Beeman, K.M. Hans, M.G. Mesa, P. Haner, and J.J. Warren. 1997. Gas Bubble Disease Research and Monitoring. 1996 Annual Report.
1998 Mesa, M.G., J. Beeman, K.M. Hans, P. Haner, L. Weiland, T.C. Robinson, and A.G. Maule. in BPA review. Gas Bubble Disease Research and Monitoring. 1997 Annual Report
1999 Beeman, J., T. C., Robinson, P. Haner, S. VanderKooi, and A.G. Maule. in BPA review. Gas Bubble Disease Research and Monitoring. 1998 Annual Report.
2000 Beeman, J., T. C., Robinson, P. Haner, S. VanderKooi, and A.G. Maule. in preparation. Gas Bubble Disease Research and Monitoring. 1999 Annual Report.
1998 Beeman, J.W. and A.G. Maule. 1998. A new miniature pressure-sensitive radio transmitter. North American Journal of Fisheries Management. 18:458-464
1999 Hans, K.M., M.G. Mesa, and A.G. Maule. 1999. Rate of disappearance of gas bubble trauma signs in juvenile salmonids. Journal of Aquatic Animal Health 11: 383-390.
1999 Weiland, L.K., M.G. Mesa, and A.G. Maule. 1999. Influence of infection with Renibacterium salmoninarum on susceptibility of juvenile spring chinook salmon to gas bubble trauma. Journal of Aquatic Animal Health 11:123 129.
2000 Mesa, M.G., L.K. Weiland, and A.G. Maule. 2000. Progression and severity of gas bubble trauma in juvenile salmonids. Transactions American Fisheries Society. 129: 174-185

Section 3. Relationships to other projects

Project IDTitleDescription
198712700 Smolt Monitoring Project We provide technical assistance for the GBT monitoring

Section 4. Budget for Planning and Design phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2003 costSubcontractor
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
Outyear budgets for Planning and Design phase

Section 5. Budget for Construction and Implementation phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2003 costSubcontractor
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
Outyear budgets for Construction and Implementation phase

Section 6. Budget for Operations and Maintenance phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2003 costSubcontractor
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
Outyear budgets for Operations and Maintenance phase

Section 7. Budget for Monitoring and Evaluation phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2003 costSubcontractor
1. Determine significance of GBD in juvenile salmonids migrating in the Snake and Columbia rivers a. Maintain and distribute dissecting microscopes to be used by SMP monitors 5 $5,120
NOTE: Duration of all tasks is based on continuing need to monitor GBT in emigrants. b.Train SMP and, USFWS employees and regional consultants in the proper method for detecting signs of GBT 5 $9,092
c.Provide support for QA/QC 5 $2,673
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
1. Determine significance of GBD in juvenile salmonids migrating in the Snake and Columbia rivers 2004 2007 $77,194
Outyear budgets for Monitoring and Evaluation phase
FY 2004FY 2005FY 2006FY 2007
$17,753$18,441$20,000$21,000

Section 8. Estimated budget summary

Itemized budget
ItemNoteFY 2003 cost
Personnel FTE: 0.16 $7,420
Fringe $2,226
Supplies $1,000
Travel $2,002
Indirect $4,237
$16,885
Total estimated budget
Total FY 2003 cost$16,885
Amount anticipated from previously committed BPA funds$0
Total FY 2003 budget request$16,885
FY 2003 forecast from 2002$26,890
% change from forecast-37.2%
Reason for change in estimated budget

The number of GBT monitoring sites was reduced and the number of training sessions were reduced.

Reason for change in scope

The Oregon and Washington water quality agencies reduced their requirments for granting the water quality waiver to allow voluntary spill.

Cost sharing
OrganizationItem or service providedAmountCash or in-kind

Reviews and recommendations

This information was not provided on the original proposals, but was generated during the review process.

Recommendation:
Fundable only if response is adequate
Date:
Aug 2, 2002

Comment:

Generally fundable, but a response is needed on administration and sampling. Could this proposal be combined with another larger program for efficiency and programmatic review?

Comments from ISRP were mixed reflecting the historic value of the program but the declining needs due to mitigation being put in place and evidence that TDG levels up to 120% are not showing signs of GBD in salmonids. Also, there were and remain questions about the design of the sampling.

The FY00 ISRP recommendation was to fund for one year: "Subsequent funding would be contingent on programmatic review. Assuming the monitoring continues, this would be a candidate for a multi-year review cycle. This entire set of smolt monitoring projects needs to receive a programmatic review with one of the goals to develop and justify a program-wide design that really is capable of delivering enough data, of high enough precision, to answer specific management questions." It appears that after ten years of GBD R&D the question of how much M&E is needed in the future needs complete examination. If the Council calls for an independent review, here are some of the topics and questions that it could address regarding GBD monitoring and associated TDG causes:

  1. A status report on the USACE on construction of TDG mitigation on all federal dams primarily in the form of flip lips. How have those functioned and what is the TDG duration curve at each dam under various flow scenarios?
  2. FCRPS models indicate that spill can be controlled in most years through storage operations and spill in recent years is largely voluntary. There are models that predict the amount of TDG expected for various flow/spill scenarios and flood conditions. If those analyses show that TDG is highly unlikely to be violated, then this might be evidence to eliminate or modify the GBD program. Do the models have good calibration so we can depend on them?
  3. GBD risk to the population of juvenile migrants is primarily contingent upon the various passage strategies employed -- transportation, spill, bypass, etc. The GBD program should be keyed into regional plans of the use of transportation and in-river paths.
  4. TDG levels of up to 120% appear to be an acceptable level of risk to salmonids given potential benefits of spillway passage across dams. Thus, the need to maintain 110%, the previous standard should be re-examined for Columbia and Snake river dams.
  5. During floods and emergency outages, TDG may rise unexpectedly and cause high levels of GBD even with flip lips in place. It would be interesting to hear whether a GBD SWAT team could be developed for limited but specific duty. For example in years when high flows are anticipated, uncontrolled spill and TDG's are expected to rise above 130%. This can be modeled ahead of the event. Although the Corps could maximize transportation, current JBS capture efficiency will decline on the rising limb of the hydrograph exposing higher numbers of migrants to high TDG. During emergencies, or future anticipated flood conditions, the agencies should maintain a capability to sample for GBD on short notice by having the expertise available that can mobilize to a specific site for a specific problem.

Recommendation:
Core Program
Date:
Oct 24, 2002

Comment:

The Water Quality Planning Group recognizes the importance of this project as an ongoing and required supporting component of the Biological Opinion Spill Program, e.g., the work supported by this project is required by the state water quality agencies to maintain the annual BiOp spill monitoring program. The group noted the low cost of continued implementation. Unlike the Independent Scientific Review Group, combining this project with the previous project, i.e., 35013, was deemed unnecessary.
Recommendation:
Fund
Date:
Nov 5, 2002

Comment:

Fundable agree with CBFWA's Core Program Ranking, a response was provided on administration and sampling. This project provides necessary operation and maintenance services and training for the Fish Passage Center's gas bubble disease monitoring. Could this proposal be combined with another larger program for efficiency and programmatic review, such as the Fish Passage Center? The proponent may be correct in their response that such an arrangement would actually increase cost of administration, but this administrative issue deserves further consideration from Council or BPA. If funded, this project should be coordinated with other monitoring projects to ensure compatibility of objectives, common methods, and protocols. This coordination could be accomplished under the favorably reviewed CBFWA proposal #35033.
Recommendation:
Date:
Jan 21, 2003

Comment:

Statement of Potential Biological Benefit
Indirect. The proposal is to continue the training and equipment maintenance to support the quality assurance and control of the spill program GBD monitoring. The program monitors juvenile migrants for signs of gas bubble disease.

Comments
The ISRP posed five questions for a possible independent review team. One deals with the rationale for continuation of the 110% in the light of apparent acceptable risk of exposure to 120%. The ISRP should understand that the continuation of the monitoring program reflects the requirement placed on the NMFS spill program by the state water quality agencies. Further, discussions with the states regarding changing the standard have led to proposal 35013. This project would provide the information the states believe necessary to establish site specific standards The program requires state waivers by WA and OR.

Already ESA Required?
No

Biop?
Yes


Recommendation:
Fund (Tier 1)
Date:
Jun 11, 2003

Comment:

Category:
1. Council Staff preferred projects that fit province allocation

Comments:


Recommendation:
Date:
Aug 4, 2003

Comment:

Budget consistent with NPCC recommendation.
Recommendation:
Date:
Sep 20, 2003

Comment:

These changes reflect estimated COLAs for staff.
REVIEW:
NW Power and Conservation Council's FY 2006 Project Funding Review
Funding category:
expense
Date:
May 2005
FY05 NPCC start of year:FY06 NPCC staff preliminary:FY06 NPCC July draft start of year:
$16,885 $16,885 $16,885

Sponsor comments: See comment at Council's website