FY 2002 Mountain Snake proposal 200207400

Section 1. Administrative

Proposal titleProtect and Restore Crooked Fork Creek to Colt Killed Analysis Area
Proposal ID200207400
OrganizationNez Perce Tribe Fisheries and Watershed (NPT)
Proposal contact person or principal investigator
NameRebecca A. Lloyd
Mailing addressNez Perce Tribe Fisheries Watershed, P.O. Box 365 Lapwai, ID 83540
Phone / email2088437144 / rebeccal@nezperce.org
Manager authorizing this projectIra Jones
Review cycleMountain Snake
Province / SubbasinMountain Snake / Clearwater
Short descriptionThis project will protect, restore, and return critical spawning and rearing habitat using a holistic approach beginning with a comprehensive watershed assessment, which will target restoration projects. Projects coordinated with USFS and PCTC.
Target speciesspring chinook, Snake River summer steelhead (ESU-threatened-NMFS), bull trout (threatened-USFWS), Westslope cutthroat
Project location
LatitudeLongitudeDescription
Crooked Fork Creek and Colt Killed Creek flow together to form the headwaters of the Lochsa River. The proposal includes the total area encompassed by Crooked Fork and Colt Killed watersheds.
46.62 -114.66 Crooked Fork
46.5048 -114.6783 Colt Killed Creek
Reasonable and Prudent Alternatives (RPAs)

Sponsor-reported:

RPA
Habitat RPA Action 149
Habitat RPA Action 150

Relevant RPAs based on NMFS/BPA review:

Reviewing agencyAction #BiOp AgencyDescription
NMFS Action 154 NMFS BPA shall work with the NWPPC to ensure development and updating of subbasin assessments and plans; match state and local funding for coordinated development of watershed assessments and plans; and help fund technical support for subbasin and watershed plan implementation from 2001 to 2006. Planning for priority subbasins should be completed by the 2003 check-in. The action agencies will work with other Federal agencies to ensure that subbasin and watershed assessments and plans are coordinated across non-Federal and Federal land ownerships and programs.

Section 2. Past accomplishments

YearAccomplishment

Section 3. Relationships to other projects

Project IDTitleDescription
199607703 Protecting and Restoring the Waw'aatamnima [Fishing (formerly Squaw)] Creek to 'Imnaamatnoon [Legendary Bear (formerly Papoose)] Creek Watersheds Analysis Area Crooked Fork to Colt Killed Creek Analysis Area is adjacent to this project area, by implementing similar restoration work in Crooked Fork to Colt Killed Analysis Area all habitat within the Upper Lochsa will be connected.
199809800 Salmon Supplementation in Idaho Rivers Crooked Fork, Brushy Fork, and Colt Killed Creeks are included in the ISS study area. Protecting and restoring stream habitat in these basins will improve the quality of the ISS data set.
199706000 # 19970600 Nez Perce Tribal Focus Watershed Program Proposed work in the Crooked Fork To Colt Killed Creek Analysis Area supports and implement the goals of this program.
152 RPA #152- The action agencies shall coordinate their efforts and support offsite habitat enhancement measures undertaken by other Federal agencies, states, TRIBES, and local governments. Funding this project will allow action agencies to meet their action objective and tribal trust responsibilty to support important habitat enhancement measures and protection efforts with the Nez Perce Tribe as the lead agency.

Section 4. Budget for Planning and Design phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2002 costSubcontractor
1. Characterize and analyze the current condition of the Analysis Area in order to guide restoration projects. b.Develop and administer EAWS contract. Collaborative effort with the CNF. 1 $22,960
1 c.Oversee the data collection and composition of the EAWS. Collaborative effort with CNF. 1 $73,044
2. Reduce sedimentation to streams from road-associated sources. a. Complete a transportation plan for all roads. 1 $10,924
2 b. Identify roads that are candidates for obliteration (also referred to as decommissioning). Collaborative effort with the CNF. 1 $0
2 f. Using survey notes, transportation plans, maps, and aerial photos from the CNF and PCTC, identify roads not needed by each agency. 1 $0
2 g. Complete all NEPA and permitting processes for implementation of obliteration. Collaborative effort with the CNF. 1 $38,036 Yes
2 h. Develop partnering agreements with CNF and PCTC. on-going $5,506
3. Eliminate unnatural passage barriers in order to return spawning and rearing habitat to targeted species, restore naturally functioning stream systems, and reduce system failures resulting from inadequately sized culverts. d. Design replacement culverts that will provide passage for all aquatic species and that will function as a part of the stream system. Coordinated with CNF and PCTC. on-going $0
3 e. Complete NEPA and all permits necessary for implementation of project. Lead agency CNF. 1 $0
3 f. Where appropriate develop cost-share agreement with PCTC and/or CNF. on-going $0
3 g. Develop and award culvert replacement contract. Lead agency is CNF. on-going $0
3 h. Administer culvert installation contract. Collaborate with CNF and PCTC. on-going $0
4. Restore riparian areas and stream habitat condition in order to reduce water temperature, and improve streambank stability. e. Coordinate projects with the CNF and PCTC, on projects where there is a common interest, develop partnering agreements. on-going $0
4 f. Design stream restoration projects such as reintroduction of large woody debris. on-going $0
4 g. Complete NEPA and all permits necessary for implementation of project. 1 $0
4 h. Develop and award stream restoration contract. on-going $0
4 i. Administer stream restoration contract. on-going $0
4 k. Design and implement riparian restoration projects, such as riparian plantings or noxious weed control. on-going $0
5. Monitor and evaluate road obliteration implementation and effectiveness. a. Review objectives and tasks of the road obliteration implementation and effectiveness monitoring plan. on-going $0
9. Provide office and Clerical support. a. Provide office and clerical support. on-going $5,962
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
1. Characterize and analyze the current condition of the Analysis Area in order to guide restoration projects. 2003 2006 $0
2. Reduce sedimentation to streams from road-associated sources. 2003 2006 $159,700
3. Eliminate unnatural passage barriers in order to return spawning and rearing habitat to targeted species, restore naturally functioning stream systems, and reduce system failures resulting from inadequately sized culverts. 2003 2006 $518,200
4. Restore riparian areas and stream habitat condition in order to reduce water temperature, and improve streambank stability. 2003 2006 $361,300
5. Monitor and evaluate road obliteration implementation and effectiveness. 2003 2006 $27,200
9. Provide office and Clerical support. 2003 2006 $46,000
Outyear budgets for Planning and Design phase
FY 2003FY 2004FY 2005FY 2006
$257,500$278,100$284,300$293,000

Section 5. Budget for Construction and Implementation phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2002 costSubcontractor
1. Characterize and analyze the current condition of the Analysis Area in order to guide restoration projects. a. Complete and extend the Ecosystem Analysis at the Watershed Scale (EAWS) in the Crooked Fork to Colt Killed Analysis Area. 1.2 $152,879 Yes
1 d. Inventory wetland areas. Collaborative with the CNF. $3,845
1 e. Inventory noxious weed invasions. Collaborative effort with the CNF. $13,109
1 f. Complete roads analysis for all roads. Collaborative effort with the CNF. $19,156
2. Reduce sedimentation to streams from road-associated sources. c. Train survey crew. Collaborative effort with the CNF. On-going $0
2 d. Survey roads identified as candidates for obliteration to determine the level of treatment required to stabilize the road, reduce sedimentation, and restore drainage. Collaborative effort with the CNF. On-going $0
2 e. Map locations of roads using GPS units. Coordinated with the CNF. On-going $12,088
2 i. Obliterate 25 miles of road per year. Collaborative effort with the CNF. On-going $0
3. Eliminate unnatural passage barriers in order to return spawning and rearing habitat to targeted species, restore naturally functioning stream systems, and reduce system failures resulting from inadequately sized culverts. a. Inventory all culverts in the project area. Collaborative effort with the CNF and PCTC. On-going $17,350
3 b. Identify culverts that are fish barriers and/or are improperly sized. Collaborative effort with the CNF and PCTC. On-going $12,979
3 c. Survey three project locations per year. Collaborative effort with the CNF and PCTC. On-going $0
4. Restore riparian areas and stream habitat condition in order to reduce water temperature, and improve streambank stability. a. Survey streams to assess in-stream and riparian habitat condition. Tiered to the NPT Watershed Recovery monitoring plan and coordinated with the CNF. On-going $12,979
4 b. Collect baseline hydrologic data on flow, temperature, and sediment. Tiered to the NPT Watershed Recovery monitoring plan and coordinated with the CNF. $7,919
4 c. Task C. Collect data on streams using GPS units. Collaborative effort with CNF. $3,026
4 d. Identify areas where in-stream restoration may be required to correct limiting factors. $0
4 j. Identify areas where active riparian restoration may be required to correct limiting factors. $0
8. Dissemination of project information and peer review. Lead agency-NPTFW. a. Complete quarterly and end of year reports as they become due. $3,080
8 b. Perform necessary presentations to the public and project peers. $6,735
8 c. Presentation of project and critique by Washington State University peer reviews. $1,788
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
1. Characterize and analyze the current condition of the Analysis Area in order to guide restoration projects. 2003 2006 $56,900
2. Reduce sedimentation to streams from road-associated sources. 2003 2006 $696,600
3. Eliminate unnatural passage barriers in order to return spawning and rearing habitat to targeted species, restore naturally functioning stream systems, and reduce system failures resulting from inadequately sized culverts. 2003 2006 $100,300
4. Restore riparian areas and stream habitat condition in order to reduce water temperature, and improve streambank stability. 2003 2006 $131,100
8. Dissemination of project information and peer review. Lead agency-NPTFW. 2003 2006 $105,200
Outyear budgets for Construction and Implementation phase
FY 2003FY 2004FY 2005FY 2006
$266,400$264,900$275,300$283,600

Section 6. Budget for Operations and Maintenance phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2002 costSubcontractor
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
Outyear budgets for Operations and Maintenance phase

Section 7. Budget for Monitoring and Evaluation phase

Task-based budget
ObjectiveTaskDuration in FYsEstimated 2002 costSubcontractor
5. Monitor and evaluate road obliteration implementation and effectiveness. a. Review objectives and tasks of the road obliteration implementation and effectiveness monitoring plan. On-going $0
5 b. Establish monitoring sites in the Analysis Area. On-going $0
5 c. Establish monitoring sites in the analysis area. On-going $0
6. Monitor and evaluate culvert replacements. a. Evaluate success of culvert design and installation by conducting spawning surveys to record presence of targeted species above culvert. On-going $0
6 b. Inspect each culvert one year after installation. Record percent of substrate recruitment in culvert bottom, describe inlet and outlet, and record pictures at photo points. On-going $0
6 c. Produce a culvert replacement monitoring and evaluation report, c On-going $0
7. Long-term monitoring and evaluation of watershed recovery. Tier to monitoring and evaluation proposal. Lead agency NPTFW. a. Coordinate timing and transfer of data collection to meet needs of EAWS and needs of M&E plan. On-going $0
Outyear objectives-based budget
ObjectiveStarting FYEnding FYEstimated cost
5. Monitor and evaluate road obliteration implementation and effectiveness. 2003 2006 $63,100
6. Monitor and evaluate culvert replacements. 2003 2006 $61,400
7. Long-term monitoring and evaluation of watershed recovery. Tier to monitoring and evaluation proposal. Lead agency NPTFW. 2003 2006 $15,800
Outyear budgets for Monitoring and Evaluation phase
FY 2003FY 2004FY 2005FY 2006
$32,300$34,500$37,000$36,400

Section 8. Estimated budget summary

Itemized budget
ItemNoteFY 2002 cost
Personnel FTE: 3, seasonals - 2 $159,764
Fringe 30% -Taxed/permanent staff 15% -Tax exempt/permanent staff 5%-Temporary staff $27,392
Supplies $2,682
Travel $14,685
Indirect $43,154
Subcontractor EAWS and start NEPA $170,000
Other vehicles $5,688
$423,365
Total estimated budget
Total FY 2002 cost$423,365
Amount anticipated from previously committed BPA funds$0
Total FY 2002 budget request$423,365
FY 2002 forecast from 2001$0
% change from forecast0.0%
Cost sharing
OrganizationItem or service providedAmountCash or in-kind

Reviews and recommendations

This information was not provided on the original proposals, but was generated during the review process.

Recommendation:
Fundable only if response is adequate
Date:
Sep 28, 2001

Comment:

Response needed. This clearly presented proposal to protect and restore fish habitat in a system of streams is thorough, detailed, and well supported by references. The scheme of tasks, however, needs much reorganization. Most of the tasks shown under the Construction & Implementation Phase really belong in the Planning & Design Phase, and a few of them in the M&E Phase. The Construction & Implementation Phase should include only tasks in which something is built or in which treatments are done. All the tasks look necessary, and it should be easy to regroup them more logically in the revised proposal.

Formal watershed analysis apparently is not finished (USFS started it for Crooked Fork to Brushy Fork drainages; from presentation it sounded about 1/3 complete), and EAWS is proposed within the project, but a wealth of previous analyses of habitat problems (including road and culvert alteration needs) serves as a sound basis for the proposal. Thus, although results from the EAWS should be the basis for the proposal, approving the project as proposed appears to be much more justified than in some other projects where watershed analysis has not yet been done.

General comment for NPT habitat projects: Although M and E linkages ("tiers") are provided in the set of NPT habitat proposals, this proposal and the set of NPT habitat proposals need to demonstrate closer ties to the NPT and other fish monitoring projects in the watershed and province (e.g. NPT projects 1988335003, 199703000, IDFG project 199107300, and the ISS studies). In the long term, fish-monitoring data will be critical in determining the efficacy of the restoration activities. The response needs to describe clear coordination between this proposal, proposal 28045, and the NPT fisheries and other entities' monitoring programs; and demonstrate how data and analysis will be shared between the projects. In addition, see the ISRP's comments on 28045 and programmatic comments on M&E at the beginning of this report. The NPT may want to submit one coordinated response for its numerous habitat projects.

The review group also suggests that future terrestrial monitoring efforts be made compatible with one of the national terrestrial survey efforts. Perhaps an intensification of the National Resources Inventory survey sites and data collection protocols would serve the region well. See the Proposals #200002300 and #200020116 and ISRP reviews in the Columbia Plateau.


Recommendation:
High Priority
Date:
Nov 30, 2001

Comment:

M4 - There is a 5% personnel cost share by the USFS for FY2002 that was not listed in the budget portion of the proposal. This project addresses RPA 150 and 154.
Recommendation:
Fund
Date:
Dec 21, 2001

Comment:

Fundable. This proposal to protect and restore fish habitat in a system of streams is thorough, detailed, and well supported with references. Deficiencies of organization in the proposal were corrected in the response. Watershed analysis is not finished (USFS started it for some drainages; it may be about 1/3 complete), and EAWS (Ecosystem Analysis at the Watershed Scale) is proposed within the project. Previous analyses of habitat problems (including road and culvert alteration needs) serve as a sound basis for the proposal in the meantime. Thus, although results from the EAWS must be the basis for the full project, approval of the initial work proposed appears more justified than in some other projects where watershed analysis has not been finished. The watershed analysis should be closely keyed to habitat needs of critical life stages of the fishes involved. (In this regard, the reviewers alert the sponsor that an ISRP programmatic statement concerning watershed assessment—including EAWS—may soon be issued to help the process.) Regarding M&E, in the long term, fish-monitoring data will be crucial in determining efficacy of the restoration. Therefore, the project needs to demonstrate close ties to the NPT and other fish monitoring projects in the watershed and province (e.g. NPT projects 1988335003, 199703000, IDFG project 199107300, and the ISS studies). There must also be clear coordination with Project 28045. The response addressed those issues.

To assist in establishing a sound basinwide monitoring program, proponents are referred to the programmatic section of this report on Monitoring, the specific comments on Aquatic Monitoring and Evaluation, and the specific comments on Terrestrial Monitoring and Evaluation.


Recommendation:
Date:
Feb 1, 2002

Comment:

Statement of Potential Biological Benefit to ESU
Benefits are indirect. This project will provide a means to understand the whole watershed and to rationally direct recovery projects/actions. It will also seek to improve habitat through culvert replacement, road obliteration, and riparian replanting.

Comments
This project will undertake a watershed analysis, but this subbasin is not identified as a priority subbasin in the BiOp. Also, the project will continue restoration projects in the area prior to the completion of the watershed assessment. This project has some merit, but much of the habitat degradation is from past Forest Management and road construction. Much of the watershed inventory has already been done by the USFS. It seems that there is a redundancy in funding one entity to shadow another entity who has the more direct responsibility.

Already ESA Req? No

Biop? Yes


Recommendation:
C
Date:
Feb 11, 2002

Comment:

Do not recommend. This project should wait until subbasin planning is completed and is reviewed under BPA's policy for funding habitat projects on federal lands.
Recommendation:
Fund
Date:
Apr 19, 2002

Comment:

Council recommendation: These are three [28047, 28048, 28059] (of the six total) new anadromous fish focused habitat restoration and protection proposals that the Council recommends for funding in the Clearwater basin in this cycle. Each of them was rated as fully "fundable" by the ISRP and high priority by CBFWA. The regional prioritization group for the Mountain Snake province recommends them as priorities. NMFS has noted that all three correspond to RPA 154 in the Biological Opinion (the sponsors suggest that additional RPAs -- 149 and 152 -- are addressed as well). Given the ISRP support, correspondence to a BiOp RPA, and priority given by the local managers and interests, the Council's general funding principles support this new work. The Council recognizes that portions of these projects are for additional watershed assessment type activities, which, as a general rule, the Council is not expanding prior to subbasin planning (the amount dedicated to such work varies for each of the three projects). However, this assessment work builds upon substantial prior assessment work that has been completed within the Clearwater subbasin, and it targets areas that have been deemed priorities for additional assessment in those past subbasin-wide efforts. This prioritization of additional assessment work is precisely what is anticipated to occur in most areas of the Columbia basin during subbasin planning. Since this prioritization has already been largely accomplished in the Clearwater prior to subbasin planning, the Council does not believe that these focused assessment activities within these projects need to wait for subbasin planning.

The primary issue comes from Bonneville's comments. Bonneville's comments note that the two Nez Perce projects should be evaluated relative to the draft proposed interim policy for funding habitat activities on federally owned land. As noted in the programmatic issues, the Council does not believe that the draft interim policy, as currently written, should be determinative of the Council recommendation in this funding cycle. However, the Council understands the major themes of the draft interim policy to focus on federal cost-share and the relationship to other Bonneville investments, and these two projects address those elements.

For project 28047 (Red River) the sponsor reports a proposed FY 02 cost-share of $365,000 to match with its FY 02 request for $95,000 of Bonneville funds. This amounts to an approximate cost-share of 79% for this project in FY 02. The sponsors have provided detailed information of past Bonneville investments in this project area extensive, showing that those investments have spanned several years, varied strategies (including habitat restoration and protection, research, and artificial production initiatives), and total in the millions of dollars.

For project 28048 (Crooked Fork Creek to Colt Killed Area) the sponsor reports a proposed FY 02 cost-share of $95,000 to match with its FY 02 request for $174,482 of Bonneville funds. This amounts to an approximate cost-share of 35% in FY 02. The sponsors have provided detailed information of past Bonneville investments in this project area extensive, showing that those investments have spanned several years, varied strategies (including both habitat restoration and protection and artificial production initiatives), and total in the millions of dollars.

For project 28059 (Lapwai Creek Watershed) the sponsor reports a proposed FY 02 cost-share of $165,000 to match with its FY 02 request for $ 372,060 of Bonneville funds. This amounts to an approximate cost-share of 31%. It should also be noted that Lapwai Creek is one of the rearing and acclimation sites for NPTH.


Recommendation:
Fund
Date:
Jul 11, 2002

Comment:

Fund
Recommendation:
Fund
Date:
Sep 20, 2003

Comment:

Increase in 2005, due to increase in implementation vs planning
Recommendation:
Date:
Sep 20, 2003

Comment:


REVIEW:
NW Power and Conservation Council's FY 2006 Project Funding Review
Funding category:
expense
Date:
May 2005
FY05 NPCC start of year:FY06 NPCC staff preliminary:FY06 NPCC July draft start of year:
$221,048 $221,048 $221,048

Sponsor comments: See comment at Council's website